Transcript: COX10-AS1:8

Basic information

LNCipedia transcript ID: COX10-AS1:8 
LNCipedia gene ID: COX10-AS1
Location (hg38): chr17:13879896-13892859
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 611 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT145737; FPKM1_group_12346_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.574 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDRT15-2:7
4.0 COX10-AS1:8
4.1 COX10-AS1:8
5.0 COX10-AS1:8
5.1 COX10-AS1:8
5.2 COX10-AS1:8