Transcript: CPB2-AS1:11

Basic information

LNCipedia transcript ID: CPB2-AS1:11 
LNCipedia gene ID: CPB2-AS1
Location (hg38): chr13:46052822-46102544
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2120 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235903.3|ENCT00000112285.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.3854 non-coding 
CPAT coding probability 4.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CPB2-AS1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CPB2-AS1:11
5.0 CPB2-AS1:11
5.1 CPB2-AS1:11
5.2 CPB2-AS1:11