Transcript: CPB2-AS1:18

Basic information

LNCipedia transcript ID: CPB2-AS1:18 
LNCipedia gene ID: CPB2-AS1
Location (hg38): chr13:46052848-46116561
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4320 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235903.3|MICT00000094152.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.6045 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CPB2-AS1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CPB2-AS1:18
5.0 CPB2-AS1:18
5.1 CPB2-AS1:18
5.2 CPB2-AS1:18