Transcript: CPB2-AS1:2

Basic information

LNCipedia transcript ID: CPB2-AS1:2 
LNCipedia gene ID: CPB2-AS1
RefSeq ID: NR_046226
Location (hg38): chr13:46052848-46101347
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3508 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT033622; NR_046226; NR_046226.1
Alternative gene names: ; CPB2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.9801 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CPB2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC63-1:3
4.0 CPB2-AS1:2
4.1 CPB2-AS1:2
5.0 CPB2-AS1:2
5.1 CPB2-AS1:2
5.2 CPB2-AS1:2