Transcript: CPEB2-DT:16

Basic information

LNCipedia transcript ID: CPEB2-DT:16 
LNCipedia gene ID: CPEB2-DT
Location (hg38): chr4:15001052-15004323
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3272 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247624.2|HBMT00001080629.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 157.5336 coding 
CPAT coding probability 88.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CPEB2-DT:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CPEB2-AS1:4
5.0 CPEB2-AS1:4
5.1 CPEB2-DT:3
5.2 CPEB2-DT:16