Transcript: CPEB2-DT:18

Basic information

LNCipedia transcript ID: CPEB2-DT:18 
LNCipedia gene ID: CPEB2-DT
Location (hg38): chr4:14993450-15002757
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3498 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247624.2|MICT00000261639.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.7749 non-coding 
CPAT coding probability 65.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CPEB2-DT:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CPEB2-AS1:7
5.0 CPEB2-AS1:7
5.1 CPEB2-DT:5
5.2 CPEB2-DT:18