Transcript: CSE1L-AS1:14

Basic information

LNCipedia transcript ID: CSE1L-AS1:14 
LNCipedia gene ID: CSE1L-AS1
Location (hg38): chr20:49036753-49037122
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 370 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT080190; FPKM1_group_19378_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CSE1L-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STAU1-4:1
4.0 lnc-STAU1-4:1
4.1 CSE1L-AS1:14
5.0 CSE1L-AS1:14
5.1 CSE1L-AS1:14
5.2 CSE1L-AS1:14