Transcript: CSE1L-AS1:7

Basic information

LNCipedia transcript ID: CSE1L-AS1:7 
LNCipedia gene ID: CSE1L-AS1
Location (hg38): chr20:49032624-49046684
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8812 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227431.1|HBMT00000902712.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 84.2974 coding 
CPAT coding probability 14.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CSE1L-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CSE1L-AS1:7
5.0 CSE1L-AS1:7
5.1 CSE1L-AS1:7
5.2 CSE1L-AS1:7