Transcript: CSTF3-DT:10

Basic information

LNCipedia transcript ID: CSTF3-DT:10 
LNCipedia gene ID: CSTF3-DT
RefSeq ID: NR_034027
Location (hg38): chr11:33161657-33191598
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2062 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034027.1
Alternative gene names: CSTF3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.0996 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CSTF3-DT:10 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 CSTF3-DT:10
5.1 CSTF3-DT:10
5.2 CSTF3-DT:10