Transcript: CYYR1-AS1:3

Basic information

LNCipedia transcript ID: CYYR1-AS1:3 
LNCipedia gene ID: CYYR1-AS1
Location (hg38): chr21:26405943-26543472
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 330 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000197934.4|ENCT00000270607.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -702.0506 non-coding 
CPAT coding probability 5.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CYYR1-AS1:3 no no no no

Available literature

  1. Casadei (2014), Characterization of human gene locus CYYR1: a complex multi-transcript system., Mol. Biol. Rep.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CYYR1-AS1:3
5.0 CYYR1-AS1:3
5.1 CYYR1-AS1:3
5.2 CYYR1-AS1:3