Transcript: DAB1-AS1:10

Basic information

LNCipedia transcript ID: DAB1-AS1:10 
LNCipedia gene ID: DAB1-AS1
Location (hg38): chr1:57860581-57867498
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 691 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000432897; ENST00000432897.1; RP4-737A23.2-003; OTTHUMT00000022762.2; NONHSAT003484
Alternative gene names: ENSG00000226759; RP4-737A23.2; ENSG00000226759.1; OTTHUMG00000008286.3; ENSG00000226759.3; DAB1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.9877 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DAB1-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8A-2:2
3.1 lnc-C8A-4:2
4.0 DAB1-AS1:10
4.1 DAB1-AS1:10
5.0 DAB1-AS1:10
5.1 DAB1-AS1:10
5.2 DAB1-AS1:10