Transcript: DAB1-AS1:18

Basic information

LNCipedia transcript ID: DAB1-AS1:18 
LNCipedia gene ID: DAB1-AS1
Location (hg38): chr1:57860637-57862636
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 471 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000420811; ENST00000420811.1; RP4-737A23.2-004; OTTHUMT00000022763.1
Alternative gene names: ENSG00000226759; RP4-737A23.2; ENSG00000226759.1; OTTHUMG00000008286.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.9877 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DAB1-AS1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8A-2:4
3.1 lnc-C8A-4:4
4.0 DAB1-AS1:18
4.1 DAB1-AS1:18
5.0 DAB1-AS1:18
5.1 DAB1-AS1:18
5.2 DAB1-AS1:18