Transcript: DAB1-AS1:3

Basic information

LNCipedia transcript ID: DAB1-AS1:3 
LNCipedia gene ID: DAB1-AS1
RefSeq ID: NR_104362
Location (hg38): chr1:57860543-57863114
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1150 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000416598; ENST00000416598.1; RP4-737A23.2-002; OTTHUMT00000022761.1; NR_104362; NR_104362.1
Alternative gene names: ENSG00000226759; RP4-737A23.2; ENSG00000226759.1; OTTHUMG00000008286.3; ; DAB1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.9877 non-coding 
CPAT coding probability 5.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DAB1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8A-2:1
3.1 lnc-C8A-4:1
4.0 DAB1-AS1:3
4.1 DAB1-AS1:3
5.0 DAB1-AS1:3
5.1 DAB1-AS1:3
5.2 DAB1-AS1:3