Transcript: DAB1-AS1:36

Basic information

LNCipedia transcript ID: DAB1-AS1:36 
LNCipedia gene ID: DAB1-AS1
Location (hg38): chr1:57878302-57880740
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 397 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000457412; ENST00000457412.1; RP4-737A23.3-001; OTTHUMT00000022898.1
Alternative gene names: ENSG00000230363; RP4-737A23.3; ENSG00000230363.1; OTTHUMG00000008310.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -318.9321 non-coding 
CPAT coding probability 4.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DAB1-AS1:36 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8A-3:1
3.1 lnc-C8A-5:1
4.0 DAB1-AS1:36
4.1 DAB1-AS1:36
5.0 DAB1-AS1:36
5.1 DAB1-AS1:36
5.2 DAB1-AS1:36