Transcript: DANT1:2

Basic information

LNCipedia transcript ID: DANT1:2 
LNCipedia gene ID: DANT1
Location (hg38): chrX:115841007-115905137
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 15329 bp
Exons: 34
Sources: NONCODE v4
Alternative transcript names: NONHSAT138264
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.3254 non-coding 
CPAT coding probability 20.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DANT1:2 no no no no

Available literature

  1. Figueroa (2015), Two novel DXZ4-associated long noncoding RNAs show developmental changes in expression coincident with heterochromatin formation at the human (Homo sapiens) macrosatellite repeat., Chromosome Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLS3-1:3
4.0 DANT1:2
4.1 DANT1:2
5.0 DANT1:2
5.1 DANT1:2
5.2 DANT1:2