Transcript: DAOA-AS1:2

Basic information

LNCipedia transcript ID: DAOA-AS1:2 
LNCipedia gene ID: DAOA-AS1
Location (hg38): chr13:105459057-105505681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2480 bp
Exons: 7
Sources: Refseq - Dec 2014
Alternative transcript names: NR_040247
Alternative gene names: G30


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.7806 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DAOA-AS1:2 no no no no

Available literature

  1. Hattori (2003), Polymorphisms at the G72/G30 gene locus, on 13q33, are associated with bipolar disorder in two independent pedigree series., Am. J. Hum. Genet.
  2. Chumakov (2002), Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EFNB2-4:2
4.0 DAOA-AS1:2
4.1 DAOA-AS1:2
5.0 DAOA-AS1:2
5.1 DAOA-AS1:2
5.2 DAOA-AS1:2