Transcript: DARS-AS1:55

Basic information

LNCipedia transcript ID: DARS-AS1:55 
LNCipedia gene ID: DARS-AS1
Location (hg38): chr2:136000411-136016698
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231890.3|ENST00000593405.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -89.6625 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DARS-AS1:55 no no no no

Available literature

  1. Mimura (2017), Novel lnc RNA regulated by HIF-1 inhibits apoptotic cell death in the renal tubular epithelial cells under hypoxia., Physiol Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DARS-AS1:55
5.0 DARS-AS1:55
5.1 DARS-AS1:55
5.2 DARS-AS1:55