Transcript: DCST1-AS1:12

Basic information

LNCipedia transcript ID: DCST1-AS1:12 
LNCipedia gene ID: DCST1-AS1
RefSeq ID: NR_040772
Location (hg38): chr1:155045191-155051165
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1602 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_040772.1
Alternative gene names: LOC100505666


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.317 non-coding 
CPAT coding probability 10.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DCST1-AS1:12 no no no no

Available literature

  1. Li (2016), Integrated bioinformatics analysis of chromatin regulator EZH2 in regulating mRNA and lncRNA expression by ChIP sequencing and RNA sequencing., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 DCST1-AS1:12
5.1 DCST1-AS1:12
5.2 DCST1-AS1:12