Transcript: DDR1-DT:3

Basic information

LNCipedia transcript ID: DDR1-DT:3 
HGNC Gene Symbol: DDR1-DT    
HGNC Full Gene Name: DDR1 divergent transcript
Ensembl Gene ID: ENSG00000237775
Ensembl Transcript ID: ENST00000458361
Location (hg38): chr6:30866982-30875918
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3994 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458361.1; DDR1-AS1-001; OTTHUMT00000076474.3; NONHSAT108688
Alternative gene names: ENSG00000237775.1; DDR1-AS1; OTTHUMG00000031229.3; bPG70P20.2; bCX111D4.7; bQB10J12.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.1031 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DDR1-DT:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFTA2-10:1
4.0 DDR1-AS1:1
4.1 DDR1-AS1:1
5.0 DDR1-AS1:1
5.1 DDR1-DT:2
5.2 DDR1-DT:3