Transcript: DDX11-AS1:2

Basic information

LNCipedia transcript ID: DDX11-AS1:2 
LNCipedia gene ID: DDX11-AS1
Location (hg38): chr12:31057342-31073753
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 874 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA318:1
Alternative gene names: ; CONCR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.5464 non-coding 
CPAT coding probability 13.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DDX11-AS1:2 no no no no

Available literature

  1. Marchese (2016), A Long Noncoding RNA Regulates Sister Chromatid Cohesion., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 DDX11-AS1:2
4.1 DDX11-AS1:2
5.0 DDX11-AS1:2
5.1 DDX11-AS1:2
5.2 DDX11-AS1:2