Transcript: DDX11-AS1:3

Basic information

LNCipedia transcript ID: DDX11-AS1:3 
HGNC Gene Symbol: DDX11-AS1    
HGNC Full Gene Name: DDX11 antisense RNA 1
Ensembl Gene ID: ENSG00000245614
Ensembl Transcript ID: ENST00000618041
Location (hg38): chr12:31060590-31073507
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 494 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000618041.1
Alternative gene names: ENSG00000245614.3; DDX11-AS1; ; CONCR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.5464 non-coding 
CPAT coding probability 17.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DDX11-AS1:3 no no no no

Available literature

  1. Marchese (2016), A Long Noncoding RNA Regulates Sister Chromatid Cohesion., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 DDX11-AS1:3
4.1 DDX11-AS1:3
5.0 DDX11-AS1:3
5.1 DDX11-AS1:3
5.2 DDX11-AS1:3