Transcript: DDX11-AS1:7

Basic information

LNCipedia transcript ID: DDX11-AS1:7 
LNCipedia gene ID: DDX11-AS1
Location (hg38): chr12:31028676-31073786
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 20936 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245614.2|ENCT00000100362.1
Alternative gene names: CONCR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.5426 non-coding 
CPAT coding probability 4.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DDX11-AS1:7 no no no no

Available literature

  1. Marchese (2016), A Long Noncoding RNA Regulates Sister Chromatid Cohesion., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DDX11-AS1:7
5.0 DDX11-AS1:7
5.1 DDX11-AS1:7
5.2 DDX11-AS1:7