Transcript: DENND5B-AS1:4

Basic information

LNCipedia transcript ID: DENND5B-AS1:4 
LNCipedia gene ID: DENND5B-AS1
Location (hg38): chr12:31589920-31615351
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 567 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255867.1|ENST00000536397.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.3946 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DENND5B-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DENND5B-AS1:4
5.0 DENND5B-AS1:4
5.1 DENND5B-AS1:4
5.2 DENND5B-AS1:4