Transcript: DENND6A-DT:11

Basic information

LNCipedia transcript ID: DENND6A-DT:11 
LNCipedia gene ID: DENND6A-DT
RefSeq ID: NR_135550
Location (hg38): chr3:57693205-57696651
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2974 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT090095; NR_135550.1
Alternative gene names: LOC101929159


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.2984 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DENND6A-DT:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLMAP-1:2
4.0 lnc-SLMAP-1:2
4.1 lnc-SLMAP-1:2
5.0 lnc-SLMAP-1:2
5.1 DENND6A-DT:6
5.2 DENND6A-DT:11