Transcript: DISC1FP1:3

Basic information

LNCipedia transcript ID: DISC1FP1:3 
HGNC Gene Symbol: DISC1FP1    
HGNC Full Gene Name: DISC1 fusion partner 1
Ensembl Gene ID: ENSG00000261645
Ensembl Transcript ID: ENST00000562678
Location (hg38): chr11:90489310-90863696
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 796 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562678.1; RP11-660M18.2-004; OTTHUMT00000421431.1; NONHSAT023590; ENST00000562678.5
Alternative gene names: ENSG00000261645.1; RP11-660M18.2; OTTHUMG00000167309.3; DISC1FP1; ENSG00000261645.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.3431 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DISC1FP1:3 no no no no

Available literature

  1. Eykelenboom (2012), A t(1;11) translocation linked to schizophrenia and affective disorders gives rise to aberrant chimeric DISC1 transcripts that encode structurally altered, deleterious mitochondrial proteins., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAALAD2-1:3
4.0 DISC1FP1:3
4.1 DISC1FP1:3
5.0 DISC1FP1:3
5.1 DISC1FP1:3
5.2 DISC1FP1:3