Transcript: DLGAP1-AS5:3

Basic information

LNCipedia transcript ID: DLGAP1-AS5:3 
LNCipedia gene ID: DLGAP1-AS5
RefSeq ID: NR_036489
Location (hg38): chr18:4264602-4296000
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3220 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT057030; NR_036489; NR_036489.1
Alternative gene names: ; DLGAP1-AS5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.1327 non-coding 
CPAT coding probability 12.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP1-AS5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002478.1-5:6
4.0 DLGAP1-AS5:3
4.1 DLGAP1-AS5:3
5.0 DLGAP1-AS5:3
5.1 DLGAP1-AS5:3
5.2 DLGAP1-AS5:3