Transcript: DLGAP2-AS1:1

Basic information

LNCipedia transcript ID: DLGAP2-AS1:1 
HGNC Gene Symbol: DLGAP2-AS1    
HGNC Full Gene Name: DLGAP2 antisense RNA 1
Ensembl Gene ID: ENSG00000253267
Ensembl Transcript ID: ENST00000518009
Location (hg38): chr8:1604552-1622417
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1810 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518009.1; RP11-666I19.2-001; OTTHUMT00000374484.1; NONHSAT124672
Alternative gene names: ENSG00000253267.1; RP11-666I19.2; OTTHUMG00000163600.1; ENSG00000253267.5; DLGAP2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.5134 non-coding 
CPAT coding probability 11.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP2-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ERICH1-6:1
4.0 DLGAP2-AS1:1
4.1 DLGAP2-AS1:1
5.0 DLGAP2-AS1:1
5.1 DLGAP2-AS1:1
5.2 DLGAP2-AS1:1