Transcript: DOCK9-AS1:1

Basic information

LNCipedia transcript ID: DOCK9-AS1:1 
HGNC Gene Symbol: DOCK9-AS1    
HGNC Full Gene Name: DOCK9 antisense RNA 1
Ensembl Gene ID: ENSG00000229918
Ensembl Transcript ID: ENST00000439367
RefSeq ID: NR_046663
Location (hg38): chr13:98832084-98834629
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 392 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000439367.1; DOCK9-AS1-001; OTTHUMT00000045562.1; NONHSAT034894; NR_046663; NR_046663.1
Alternative gene names: ENSG00000229918.1; DOCK9-AS1; OTTHUMG00000017256.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.7957 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DOCK9-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBAC2-2:1
4.0 DOCK9-AS1:1
4.1 DOCK9-AS1:1
5.0 DOCK9-AS1:1
5.1 DOCK9-AS1:1
5.2 DOCK9-AS1:1