Transcript: DPYD-AS1:3

Basic information

LNCipedia transcript ID: DPYD-AS1:3 
HGNC Gene Symbol: DPYD-AS1    
HGNC Full Gene Name: DPYD antisense RNA 1
Ensembl Gene ID: ENSG00000232878
Ensembl Transcript ID: ENST00000630798
Location (hg38): chr1:97265446-97296147
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 724 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000630798.1
Alternative gene names: ENSG00000232878.3; DPYD-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.3487 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DPYD-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 DPYD-AS1:3
4.1 DPYD-AS1:3
5.0 DPYD-AS1:3
5.1 DPYD-AS1:3
5.2 DPYD-AS1:3