Transcript: DSCR10:2

Basic information

LNCipedia transcript ID: DSCR10:2 
LNCipedia gene ID: DSCR10
Location (hg38): chr21:38208135-38208460
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000538415; ENST00000538415.1; DSCR10-201; NONHSAT082080
Alternative gene names: ENSG00000233316; DSCR10; ENSG00000233316.3; OTTHUMG00000090611.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -633.0299 non-coding 
CPAT coding probability 5.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSCR10:2 yes no no no

Available literature

  1. Takamatsu (2002), Identification of two novel primate-specific genes in DSCR., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DSCR8-1:2
3.1 lnc-DSCR8-1:2
4.0 DSCR10:2
4.1 DSCR10:2
5.0 DSCR10:2
5.1 DSCR10:2
5.2 DSCR10:2