Transcript: DSCR9:15

Basic information

LNCipedia transcript ID: DSCR9:15 
LNCipedia gene ID: DSCR9
Location (hg38): chr21:37221444-37237744
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242553.1|ENST00000440629.1
Alternative gene names: NCRNA00038


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -176.5351 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSCR9:15 yes no no no

Available literature

  1. Takamatsu (2002), Identification of two novel primate-specific genes in DSCR., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DSCR9:15
5.0 DSCR9:15
5.1 DSCR9:15
5.2 DSCR9:15