Transcript: DSCR9:16

Basic information

LNCipedia transcript ID: DSCR9:16 
LNCipedia gene ID: DSCR9
Location (hg38): chr21:37221444-37245730
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2813 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242553.1|ENCT00000271322.1
Alternative gene names: NCRNA00038


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.6605 non-coding 
CPAT coding probability 11.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSCR9:16 yes no no no

Available literature

  1. Takamatsu (2002), Identification of two novel primate-specific genes in DSCR., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DSCR9:16
5.0 DSCR9:16
5.1 DSCR9:16
5.2 DSCR9:16