Transcript: DSCR9:2

Basic information

LNCipedia transcript ID: DSCR9:2 
LNCipedia gene ID: DSCR9
Location (hg38): chr21:37208503-37220591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00028771
Alternative gene names: XLOC_013935; linc-DYRK1A-2; NCRNA00038


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.1006 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSCR9:2 no no no no

Available literature

  1. Takamatsu (2002), Identification of two novel primate-specific genes in DSCR., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC3-1:2
3.1 lnc-TTC3-1:2
4.0 DSCR9:2
4.1 DSCR9:2
5.0 DSCR9:2
5.1 DSCR9:2
5.2 DSCR9:2