Transcript: DSG1-AS1:2

Basic information

LNCipedia transcript ID: DSG1-AS1:2 
LNCipedia gene ID: DSG1-AS1
RefSeq ID: NR_110788
Location (hg38): chr18:31343368-31426988
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 730 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110788; NR_110788.1
Alternative gene names: ; DSG1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.6708 non-coding 
CPAT coding probability 30.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSG1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSC1-1:5
4.0 DSG1-AS1:2
4.1 DSG1-AS1:2
5.0 DSG1-AS1:2
5.1 DSG1-AS1:2
5.2 DSG1-AS1:2