Transcript: DSG1-AS1:4

Basic information

LNCipedia transcript ID: DSG1-AS1:4 
HGNC Gene Symbol: DSG1-AS1    
HGNC Full Gene Name: DSG1 antisense RNA 1
Ensembl Gene ID: ENSG00000266729
Ensembl Transcript ID: ENST00000581452
Location (hg38): chr18:31353962-31401667
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 472 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000581452.1; RP11-534N16.1-003; OTTHUMT00000447392.2; NONHSAT058818
Alternative gene names: ENSG00000266729.1; RP11-534N16.1; OTTHUMG00000179625.2; ENSG00000266729.5; DSG1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 341.9072 coding 
CPAT coding probability 6.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
DSG1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSC1-1:3
4.0 DSG1-AS1:4
4.1 DSG1-AS1:4
5.0 DSG1-AS1:4
5.1 DSG1-AS1:4
5.2 DSG1-AS1:4