Transcript: DSG1-AS1:6

Basic information

LNCipedia transcript ID: DSG1-AS1:6 
LNCipedia gene ID: DSG1-AS1
RefSeq ID: NR_110789
Location (hg38): chr18:31343368-31353936
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 469 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110789; NR_110789.1
Alternative gene names: ; DSG1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -487.4845 non-coding 
CPAT coding probability 32.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSG1-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSC1-1:6
4.0 DSG1-AS1:6
4.1 DSG1-AS1:6
5.0 DSG1-AS1:6
5.1 DSG1-AS1:6
5.2 DSG1-AS1:6