Transcript: DSG2-AS1:3

Basic information

LNCipedia transcript ID: DSG2-AS1:3 
LNCipedia gene ID: DSG2-AS1
RefSeq ID: NR_045216
Location (hg38): chr18:31542146-31556911
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1986 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT058822; NR_045216; NR_045216.1
Alternative gene names: ; DSG2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.7271 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSG2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-B4GALT6-1:4
4.0 DSG2-AS1:3
4.1 DSG2-AS1:3
5.0 DSG2-AS1:3
5.1 DSG2-AS1:3
5.2 DSG2-AS1:3