Transcript: DUBR:3
Basic information
LNCipedia transcript ID: DUBR:3
HGNC Gene Symbol: DUBR
HGNC Full Gene Name:
DPPA2 upstream binding RNA
Ensembl Gene ID:
ENSG00000243701
Ensembl Transcript ID:
ENST00000463143
Location (hg38): chr3:107240692-107326701
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 801 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000463143; TCONS_00005564; ENST00000463143.1; RP11-446H18.3-004; OTTHUMT00000353694.1; NONHSAT091026; ENST00000463143.5
Alternative gene names: ENSG00000243701; XLOC_002746; linc-CCDC54; RP11-446H18.3; ENSG00000243701.1; OTTHUMG00000159173.1; LINC00883; ENSG00000243701.5; DUBR;
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
DUBR:3 | no | no | no | no |
Available literature
- Wang (2015), LncRNA Dum interacts with Dnmts to regulate Dppa2 expression during myogenic differentiation and muscle regeneration., Cell Res.
- Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-CCDC54-2:2 |
3.1 | lnc-CCDC54-2:2 |
4.0 | DUBR:3 |
4.1 | DUBR:3 |
5.0 | DUBR:3 |
5.1 | DUBR:3 |
5.2 | DUBR:3 |