Transcript: EGFLAM-AS2:1

Basic information

LNCipedia transcript ID: EGFLAM-AS2:1 
LNCipedia gene ID: EGFLAM-AS2
RefSeq ID: NR_102750
Location (hg38): chr5:38399814-38403471
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 524 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT101087; NR_102750; NR_102750.1
Alternative gene names: ; EGFLAM-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.1571 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EGFLAM-AS2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIFR-3:4
4.0 EGFLAM-AS2:1
4.1 EGFLAM-AS2:1
5.0 EGFLAM-AS2:1
5.1 EGFLAM-AS2:1
5.2 EGFLAM-AS2:1