Transcript: EGFLAM-AS4:1

Basic information

LNCipedia transcript ID: EGFLAM-AS4:1 
HGNC Gene Symbol: EGFLAM-AS4    
HGNC Full Gene Name: EGFLAM antisense RNA 4
Ensembl Gene ID: ENSG00000248730
Ensembl Transcript ID: ENST00000512496
Location (hg38): chr5:38282264-38290986
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1579 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000512496.1; EGFLAM-AS4-001; OTTHUMT00000367358.1; NONHSAT101085
Alternative gene names: ENSG00000248730.1; EGFLAM-AS4; OTTHUMG00000162114.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.1631 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EGFLAM-AS4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIFR-5:1
4.0 EGFLAM-AS4:1
4.1 EGFLAM-AS4:1
5.0 EGFLAM-AS4:1
5.1 EGFLAM-AS4:1
5.2 EGFLAM-AS4:1