Transcript: ELOA-AS1:25

Basic information

LNCipedia transcript ID: ELOA-AS1:25 
HGNC Gene Symbol: ELOA-AS1    
HGNC Full Gene Name: ELOA antisense RNA 1
Ensembl Gene ID: ENSG00000236810
Ensembl Transcript ID: ENST00000447961
Location (hg38): chr1:23771611-23772397
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447961.1; RP5-886K2.3-002; OTTHUMT00000008242.1; NONHSAT001554
Alternative gene names: ENSG00000236810.1; RP5-886K2.3; OTTHUMG00000002959.1; ENSG00000236810.5; TCEB3-AS1; ; ELOA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.7582 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ELOA-AS1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALE-1:2
4.0 TCEB3-AS1:6
4.1 TCEB3-AS1:6
5.0 TCEB3-AS1:6
5.1 ELOA-AS1:13
5.2 ELOA-AS1:25