Transcript: ENTPD1-AS1:4

Basic information

LNCipedia transcript ID: ENTPD1-AS1:4 
HGNC Gene Symbol: ENTPD1-AS1    
HGNC Full Gene Name: ENTPD1 antisense RNA 1
Ensembl Gene ID: ENSG00000226688
Ensembl Transcript ID: ENST00000458228
Location (hg38): chr10:96018720-96090225
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3274 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458228.1; RP11-429G19.2-001; OTTHUMT00000049575.1; NONHSAT015785; ENST00000458228.5
Alternative gene names: ENSG00000226688.1; RP11-429G19.2; OTTHUMG00000018822.1; ENSG00000226688.2; ENTPD1-AS1; ENSG00000226688.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.7872 coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ENTPD1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TCTN3-1:2
4.0 ENTPD1-AS1:4
4.1 ENTPD1-AS1:4
5.0 ENTPD1-AS1:4
5.1 ENTPD1-AS1:4
5.2 ENTPD1-AS1:4