Transcript: ENTPD1-AS1:7

Basic information

LNCipedia transcript ID: ENTPD1-AS1:7 
HGNC Gene Symbol: ENTPD1-AS1    
HGNC Full Gene Name: ENTPD1 antisense RNA 1
Ensembl Gene ID: ENSG00000226688
Ensembl Transcript ID: ENST00000444375
Location (hg38): chr10:96088909-96090199
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 617 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00018030; ENST00000444375.1; RP11-429G19.2-012; OTTHUMT00000049586.1; NONHSAT015792
Alternative gene names: XLOC_008914; linc-TCTN3; ENSG00000226688.1; RP11-429G19.2; OTTHUMG00000018822.1; ENSG00000226688.2; ENTPD1-AS1; ENSG00000226688.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -371.0219 non-coding 
CPAT coding probability 7.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ENTPD1-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BLNK-1:1
3.1 lnc-TCTN3-1:5
4.0 ENTPD1-AS1:7
4.1 ENTPD1-AS1:7
5.0 ENTPD1-AS1:7
5.1 ENTPD1-AS1:7
5.2 ENTPD1-AS1:7