Transcript: ENTPD1-AS1:8

Basic information

LNCipedia transcript ID: ENTPD1-AS1:8 
HGNC Gene Symbol: ENTPD1-AS1    
HGNC Full Gene Name: ENTPD1 antisense RNA 1
Ensembl Gene ID: ENSG00000226688
Ensembl Transcript ID: ENST00000452728
Location (hg38): chr10:95875388-96090198
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 858 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452728.1; RP11-429G19.2-003; OTTHUMT00000049577.1; ENST00000452728.5
Alternative gene names: ENSG00000226688.1; RP11-429G19.2; OTTHUMG00000018822.1; ENSG00000226688.2; ENTPD1-AS1; ENSG00000226688.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 10.8054 non-coding 
CPAT coding probability 54.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ENTPD1-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TCTN3-1:6
4.0 ENTPD1-AS1:8
4.1 ENTPD1-AS1:8
5.0 ENTPD1-AS1:8
5.1 ENTPD1-AS1:8
5.2 ENTPD1-AS1:8