Transcript: ENTPD3-AS1:19

Basic information

LNCipedia transcript ID: ENTPD3-AS1:19 
LNCipedia gene ID: ENTPD3-AS1
Location (hg38): chr3:40434908-40453309
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 12206 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223797.1|ENCT00000302073.1
Alternative gene names: FLJ36665


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.7944 non-coding 
CPAT coding probability 4.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ENTPD3-AS1:19 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ENTPD3-AS1:19
5.0 ENTPD3-AS1:19
5.1 ENTPD3-AS1:19
5.2 ENTPD3-AS1:19