Transcript: EP300-AS1:5

Basic information

LNCipedia transcript ID: EP300-AS1:5 
HGNC Gene Symbol: EP300-AS1    
HGNC Full Gene Name: EP300 antisense RNA 1
Ensembl Gene ID: ENSG00000231993
Ensembl Transcript ID: ENST00000420537
Location (hg38): chr22:41174591-41197456
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 457 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420537; ENST00000420537.1; RP1-85F18.5-001; OTTHUMT00000320612.1; NONHSAT086888
Alternative gene names: ENSG00000231993; RP1-85F18.5; ENSG00000231993.1; OTTHUMG00000150941.1; EP300-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.6057 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EP300-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHADL-1:1
3.1 lnc-CHADL-2:1
4.0 EP300-AS1:5
4.1 EP300-AS1:5
5.0 EP300-AS1:5
5.1 EP300-AS1:5
5.2 EP300-AS1:5