Transcript: EP300-AS1:6

Basic information

LNCipedia transcript ID: EP300-AS1:6 
LNCipedia gene ID: EP300-AS1
Location (hg38): chr22:41185216-41186316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1101 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA945:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.4636 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EP300-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 EP300-AS1:6
4.1 EP300-AS1:6
5.0 EP300-AS1:6
5.1 EP300-AS1:6
5.2 EP300-AS1:6