Transcript: EPB41L4A-DT:9

Basic information

LNCipedia transcript ID: EPB41L4A-DT:9 
HGNC Gene Symbol: EPB41L4A-DT    
HGNC Full Gene Name: EPB41L4A divergent transcript
Ensembl Gene ID: ENSG00000278921
Ensembl Transcript ID: ENST00000623705
RefSeq ID: NR_027706
Location (hg38): chr5:112419583-112420978
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1396 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000623705.1; NR_027706.1
Alternative gene names: ENSG00000278921.2; EPB41L4A-AS2; FLJ11235


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -151.927 non-coding 
CPAT coding probability 98.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
EPB41L4A-DT:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 EPB41L4A-AS2:4
4.1 EPB41L4A-AS2:4
5.0 EPB41L4A-AS2:4
5.1 EPB41L4A-DT:5
5.2 EPB41L4A-DT:9