Transcript: ERC2-IT1:3

Basic information

LNCipedia transcript ID: ERC2-IT1:3 
HGNC Gene Symbol: ERC2-IT1    
HGNC Full Gene Name: ERC2 intronic transcript 1
RefSeq ID: NR_024615
Location (hg38): chr3:55657206-55659469
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2264 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024615.1
Alternative gene names: ERC2-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.1035 non-coding 
CPAT coding probability 12.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ERC2-IT1:3 yes no no no

Available literature

  1. Onyango (1998), Molecular cloning and expression analysis of five novel genes in chromosome 1p36., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ERC2-IT1:3
5.1 ERC2-IT1:3
5.2 ERC2-IT1:3