Transcript: ERI3-IT1:5

Basic information

LNCipedia transcript ID: ERI3-IT1:5 
LNCipedia gene ID: ERI3-IT1
RefSeq ID: NR_046817
Location (hg38): chr1:44243376-44244283
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 661 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046817; NR_046817.1
Alternative gene names: ; ERI3-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -213.6477 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ERI3-IT1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC6A9-4:5
4.0 ERI3-IT1:5
4.1 ERI3-IT1:5
5.0 ERI3-IT1:5
5.1 ERI3-IT1:5
5.2 ERI3-IT1:5